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GATE Environmental Microbiology: practice questions

GATE — Environmental Science and Engineering (ES) · India · IITs and IISc on rotation (2026: IIT Guwahati)

Original practice questions written to the published syllabus · not past papers
10worked here, free
95written to this exam in this subject
13syllabus units

What this subject covers

Microorganisms as the engines of nutrient cycling, wastewater treatment, bioremediation and disease. GATE ES Section 3 examines it from cell structure to Monod kinetics and coliform counts.

In the exams: GATE ES Section 3; UGC NET Environmental Sciences Unit 3; ICAR AICE subject 71 Units 4–5 (bioremediation, composting)

What GATE asks from it

GATE — Environmental Science and Engineering, Section 3 (environmental microbiology)

Cell structure and classification, metabolism and ATP yields, fermentation and anaerobic processes, Michaelis–Menten and Monod kinetics, specific growth rate and doubling time, chemostat steady state and washout, disinfection (Ct, log reduction, D-value), nutrient cycling organisms, and MPN and membrane filtration counts, with numerical answer type questions.

Where the 95 questions fall

How our questions for GATE spread across the units of Environmental Microbiology. Difficulty: 12 easy, 58 medium, 25 hard.

Control of microorganisms: physical and chemical methods9
Coliform enumeration: MPN and membrane filtration9
Microbial metabolism: glycolysis, TCA cycle, electron transport8
Enzymes and enzyme kinetics8
Batch and continuous culture8
Microorganisms in biogeochemical cycling8
Prokaryotic and eukaryotic microorganisms; classification and diversity7
Cell structure: membranes, walls, endospores, organelles7
Fermentation and anaerobic respiration7
Bacterial growth: specific growth rate, doubling time, Monod model7
Pathogens, transmission routes and indicator organisms7
Cell chemistry: proteins, nucleic acids, lipids, polysaccharides6
Microorganisms in wastewater treatment and bioremediation4

10 practice questions, worked

Choose an answer, then open the working. Each explanation says why the right answer is right and why the others are not.

1 · Prokaryotic and eukaryotic microorganisms; classification and diversity · hard

Which method reveals the functional genes, not just the identities, of an uncultured soil community?

  1. Shotgun metagenomic sequencing
  2. Plate counting on nutrient agar
  3. Gram staining
  4. 16S rRNA amplicon sequencing alone
Answer and working

A. Shotgun metagenomic sequencing

Metagenomics sequences all DNA, revealing genes and pathways; 16S amplicons mainly identify taxa; staining and plating miss most organisms.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

2 · Cell structure: membranes, walls, endospores, organelles · medium

Which organism forms endospores and is used as an indicator of remote or intermittent faecal contamination?

  1. Giardia lamblia
  2. Escherichia coli
  3. Clostridium perfringens
  4. Vibrio cholerae
Answer and working

C. Clostridium perfringens

Its spores survive long in water, indicating past contamination and protozoan removal efficiency.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

3 · Cell structure: membranes, walls, endospores, organelles · easy

Prokaryotic ribosomes are

  1. 70S
  2. 60S
  3. 80S
  4. 90S
Answer and working

A. 70S

Prokaryotes have 70S ribosomes; eukaryotic cytoplasmic ribosomes are 80S.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

4 · Microbial metabolism: glycolysis, TCA cycle, electron transport · medium

Which bacterium oxidises ferrous iron and contributes to acid mine drainage and bioleaching?

  1. Acidithiobacillus ferrooxidans
  2. Saccharomyces cerevisiae
  3. Rhizobium leguminosarum
  4. Lactobacillus acidophilus
Answer and working

A. Acidithiobacillus ferrooxidans

A. ferrooxidans oxidises Fe²⁺ and sulphides at low pH.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

5 · Enzymes and enzyme kinetics · medium

How does a competitive inhibitor affect Km and Vmax?

  1. It lowers Vmax but leaves Km unchanged
  2. It has no effect on either
  3. It lowers both Km and Vmax
  4. Km rises; Vmax is unchanged
Answer and working

D. Km rises; Vmax is unchanged

Competitive inhibitors compete for the active site and can be overcome by more substrate; non-competitive inhibitors lower Vmax.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

6 · Control of microorganisms: physical and chemical methods · hard

According to the Chick–Watson model, ln(N/N0) = −kCⁿt with n = 1, what happens to the required contact time if the disinfectant concentration is doubled?

  1. It falls to zero
  2. It halves
  3. It doubles
  4. It stays the same
Answer and working

B. It halves

With n = 1, inactivation depends on the product Ct, so doubling C halves t.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

7 · Microorganisms in biogeochemical cycling · medium

Draining coastal sulphidic soils can create acid sulphate soils because

  1. exposed sulphides oxidise to sulphuric acid
  2. drainage adds sulphate fertiliser to the soil
  3. nitrifiers convert sulphide to nitrate
  4. methanogens produce sulphuric acid when oxygen enters
Answer and working

A. exposed sulphides oxidise to sulphuric acid

Oxidation of pyrite and other sulphides produces sulphuric acid, sharply lowering pH.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

8 · Microorganisms in biogeochemical cycling · medium

Nitrification inhibitors such as dicyandiamide and nitrapyrin act by slowing

  1. the reduction of nitrate to N2
  2. the oxidation of ammonium to nitrite
  3. the mineralisation of organic nitrogen
  4. the fixation of N2 by rhizobia
Answer and working

B. the oxidation of ammonium to nitrite

They inhibit ammonia monooxygenase, keeping nitrogen as ammonium and reducing nitrate leaching and N2O.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

9 · Pathogens, transmission routes and indicator organisms · medium

Which bacterium is spread by inhaling aerosols from cooling towers and hot-water systems?

  1. Clostridium perfringens
  2. Shigella dysenteriae
  3. Vibrio cholerae
  4. Legionella pneumophila
Answer and working

D. Legionella pneumophila

Legionella causes Legionnaires' disease via aerosols, not ingestion.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

10 · Coliform enumeration: MPN and membrane filtration · medium

On m-Endo medium in membrane filtration, total coliform colonies typically appear

  1. colourless with a black centre
  2. yellow with a halo
  3. blue at 44.5 °C
  4. red with a green metallic sheen
Answer and working

D. red with a green metallic sheen

Total coliforms show a metallic sheen on m-Endo at 35 °C; faecal coliforms are blue on m-FC at 44.5 °C.

Further reading: See the manual sources: Brock Biology of Microorganisms; Pepper et al.; Rittmann & McCarty; Standard Methods Part 9000; WHO guidelines

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Read the subject

Environmental MicrobiologyThe full study manual, free GATEFormat, sections and how it has changed

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Environmental Microbiology for other exams

UGC NET · IndiaCUET-PG · India

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