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Karnal bunt of wheat (partial bunt)

Tilletia indica Mitra, 1931 · formerly or also: Neovossia indica

Karnal bunt replaces part of some wheat grains with black, fishy-smelling spores. Yield loss is usually small, but the disease matters enormously in trade: many countries treat it as a quarantine pest and refuse wheat from areas where it occurs, so a few infected grains can block exports. It was first described near Karnal in northern India in 1931. Because the spores can survive in soil for years and travel with seed, grain, straw and machinery, regulators in importing countries require testing and certification of wheat from affected areas.

Spiny teliospore of the Karnal bunt fungus (scanning electron micrograph)
Spiny teliospore of the Karnal bunt fungus (scanning electron micrograph). Photo: Unknown author, Public domain, via Wikimedia Commons.
Type
Fungal disease · Fungus (smut fungus, a basidiomycete)
Classification
Fungi › Exobasidiomycetes › Tilletiales › Tilletiaceae
Main crops
Wheat, Triticale
Found in
South Asia, West and Central Asia, North America, Africa, Other regions
Chemical groups
FRAC 3 (mode-of-action groups, not products)
Last reviewed
2026-10-20

What causes karnal bunt of wheat?

Karnal bunt of wheat is caused by Tilletia indica Mitra, 1931, a fungus (smut fungus, a basidiomycete) (order Tilletiales, family Tilletiaceae).

Older or alternative scientific names: Neovossia indica.

Where it occurs

Present in South Asia (India, Pakistan, Nepal), Afghanistan, Iran, Iraq, Mexico, parts of the south-western United States and South Africa. It is a quarantine pest for many importing countries.

RegionStatus
South AsiaPresent; first described in 1931
West and Central AsiaPresent in some countries
North AmericaPresent in north-western Mexico and limited areas of the south-western US under regulation
AfricaPresent in South Africa
Other regionsAbsent; quarantine pest

Symptoms and identification of karnal bunt of wheat

The organism

Teliospores are large, dark brown and spiny, formed inside infected grains. Laboratory confirmation (spore morphology and PCR) is required, because the spores resemble those of the ryegrass bunt Tilletia walkeri. Teliospores are about 25-40 micrometres across, larger than those of common bunt, with a thick, spiny wall.

Signs in the crop, stage by stage

Crop stageWhat you see
Heading to grain fillNo obvious symptoms on plants.
Maturity and harvestSome grains partly replaced by black spore masses, usually starting at the embryo end along the crease; infected grains smell of rotten fish (trimethylamine).
Stored grainPartly bunted grains in samples; flour with a dark colour and fishy smell when infection is high.

Disease cycle of karnal bunt of wheat

1Teliospores insoil and on seed2Germination3Floral infection4Bunted grainsKarnal bunt of wheat(partial bunt)
Life cycle of Karnal bunt of wheat (partial bunt) — diagram drawn by Laisha from the stages below. Durations depend on temperature.

Teliospores survive in soil for several years and on seed. In moist soil around heading they germinate and produce airborne secondary spores that reach the ears and infect individual florets at flowering. Only some grains in an ear are infected. Because only florets open to infection at the right moment are affected, incidence varies greatly between seasons and fields, and most infected ears carry only a few bunted grains.

StageDurationNotes
Teliospores in soil and on seedSurvive several yearsPrimary inoculum.
GerminationAround heading, in moist soilProduces airborne spores.
Floral infectionFlowering, in cool wet weatherIndividual florets.
Bunted grainsGrain fill to maturitySpores return to soil and seed.

Temperature

Infection is favoured by cool (about 15-22 °C), cloudy, humid or rainy weather at heading and flowering.

Generations

One infection cycle per crop.

Conditions that favour it

Rain and high humidity during heading, susceptible varieties, heavy nitrogen and irrigation around heading, and infested seed and soil. Late-sown or late-maturing crops whose heading coincides with cool, rainy spells are most affected, and the disease is much more common in some years than others.

Economic threshold level (ETL)

There is no yield-based threshold; the relevant thresholds are trade and seed-certification tolerances for bunted grains, which are set by national regulations and import requirements and are often zero.

Thresholds are local. They depend on crop price, control cost, variety and natural-enemy activity, so use the figure your local extension service publishes where one exists.

Damage and yield loss from karnal bunt of wheat

Direct yield losses are usually below 1%, but quality loss and, above all, trade restrictions cause large economic losses in affected regions. Flour milled from grain with more than a few per cent bunted kernels has an unpleasant smell and colour, and such grain is downgraded or diverted to feed.

Monitoring

How to control karnal bunt of wheat (integrated management)

Control works best as a sequence: prevent, monitor, then act only when a threshold or a risk forecast says so, using the least disruptive option that works.

Cultural control

Mechanical and physical control

Biological control

Host resistance

Chemical control of karnal bunt of wheat — by mode-of-action group only

Laisha names chemical options only by their resistance-committee mode-of-action group (IRAC for insects, mites and nematodes, FRAC for fungi, oomycetes and bacteria, HRAC for weeds), never by active ingredient or product. What is registered differs by country and changes over time; the label and your local plant-protection authority decide what may be used, on which crop, at what rate and with what pre-harvest interval.

Seed treatment reduces seed-borne inoculum, and fungicide sprays at heading reduce infection where registered. What is registered differs by country and changes over time; follow the label and your local plant-protection authority.

SchemeGroupMode of actionNotes
FRAC3Demethylation inhibitors (DMI)Seed treatment and sprays at heading.

Resistance management

Look-alikes and how to tell them apart

Host range

Bread wheat, durum wheat and triticale; some wild grasses have been infected experimentally.

What is still uncertain

Grow guides for its host crops

How to grow the crop well is the first line of defence. Laisha's free grow guides cover each crop from sowing to harvest:

Not sure this is what you are seeing?Ask Laisha: describe the symptoms or send a photo, and get a reasoned first read with what to check next — for your crop, your stage and your region.Ask Laisha

Sources

  1. Tilletia indica (Karnal bunt of wheat) datasheet — CABI Compendium. https://doi.org/10.1079/cabicompendium.36168
  2. Tilletia indica (NEOVIN) — EPPO Global Database. https://gd.eppo.int/taxon/NEOVIN
  3. Histology of infection of wheat by Tilletia indica, the Karnal bunt pathogen — Phytopathology (APS). https://doi.org/10.1094/Phyto-78-1434
  4. Development of a PCR-based method for identification of Tilletia indica — Phytopathology (APS). https://doi.org/10.1094/Phyto-86-115
  5. Incidence of Karnal bunt (Tilletia indica) of wheat in southern Punjab, Pakistan — International Journal of Biosciences. https://doi.org/10.12692/ijb/12.2.279-284

Written by Laisha from the sources above, in its own words. This page is general reference, not a prescription: confirm identification locally and follow the label and your plant-protection authority.