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Red rot of sugarcane

Colletotrichum falcatum Went, 1893 (sexual stage Glomerella tucumanensis (Speg.) Arx & E. Müll.) · formerly or also: Glomerella tucumanensis, Physalospora tucumanensis

Red rot is the most destructive disease of sugarcane in South Asia and a serious one in other tropical cane regions. The fungus rots the inside of the stalk, turning it red with white cross-bands and giving it a sour, alcoholic smell; leaves dry from the top and whole clumps die. It spreads mainly through infected planting setts, and new pathogen strains repeatedly break down popular resistant varieties.

Type
Fungal disease · Fungus (ascomycete)
Classification
Fungi › Sordariomycetes › Glomerellales › Glomerellaceae
Main crops
Sugarcane
Found in
South Asia, Southeast and East Asia, Americas and the Caribbean, Africa, Indian Ocean and Oceania
Chemical groups
FRAC 1, FRAC 3, FRAC 11 (mode-of-action groups, not products)
Last reviewed
2026-10-20

What causes red rot of sugarcane?

Red rot of sugarcane is caused by Colletotrichum falcatum Went, 1893 (sexual stage Glomerella tucumanensis (Speg.) Arx & E. Müll.), a fungus (ascomycete) (order Glomerellales, family Glomerellaceae).

Older or alternative scientific names: Glomerella tucumanensis, Physalospora tucumanensis.

Where it occurs

Present in most sugarcane-growing countries. It is most damaging in South Asia, where epidemics have repeatedly forced the replacement of widely grown varieties, and is also important in parts of Southeast Asia, East Asia, the Americas, Africa and Australia.

RegionStatus
South AsiaWidespread; recurrent epidemics
Southeast and East AsiaPresent
Americas and the CaribbeanPresent
Africa, Indian Ocean and OceaniaPresent

Symptoms and identification of red rot of sugarcane

The organism

The fungus forms acervuli with dark bristles on leaf midrib lesions and on rind of infected stalks, producing sickle-shaped conidia that are spread by rain splash, irrigation water and wind-driven rain. It survives in infected setts, stubble and crop debris. Pathotypes differ in virulence on varieties.

Signs in the crop, stage by stage

Crop stageWhat you see
Leaves (any stage)Elongated, reddish lesions with dark margins on the midrib of leaves, later with straw-coloured centres and black dots.
Stalk elongation to maturityThe third or fourth leaf from the top yellows and dries along the margins, followed by drying of the whole crown; the stalk shrivels.
Inside the stalkWhen split lengthwise, the internal tissue is red with white patches running across it (cross-bands), and smells sour or alcoholic; later the pith becomes hollow and dark.
Setts after plantingInfected setts rot and fail to germinate, leaving gaps.

Disease cycle of red rot of sugarcane

1Infected setts anddebris2Infection ofstalks and leaves3Internal rot4SporulationRed rot of sugarcane
Life cycle of Red rot of sugarcane — diagram drawn by Laisha from the stages below. Durations depend on temperature.

Infected setts are the main source: buds either fail or produce infected shoots. Spores from leaf and stalk lesions are carried by rain and floodwater to other plants and enter through nodes, root primordia and borer or other wounds. The fungus also survives in stubble and debris and infects ratoons.

StageDurationNotes
Infected setts and debrisBetween cropsMain primary inoculum.
Infection of stalks and leavesDuring rain and floodingThrough nodes and wounds.
Internal rotWeeks to monthsSymptoms obvious after the rains.
SporulationOn lesionsSpread by water.

Temperature

Disease is favoured by warm, humid weather and waterlogging during the monsoon and post-monsoon period; temperatures of about 25-30 °C with high humidity speed it up.

Generations

One main crop cycle with secondary spread during wet periods.

Conditions that favour it

Planting setts from infected fields, waterlogging and flooding that spread spores, continuous monoculture of one susceptible variety, ratooning infected crops, and borer damage.

Economic threshold level (ETL)

There is no numeric economic threshold; any confirmed red rot in a seed plot means the cane should not be used for planting, and infected clumps should be removed promptly.

Damage and yield loss from red rot of sugarcane

Affected cane loses weight and sucrose sharply; fields of susceptible varieties can be lost entirely, and regional epidemics have reduced cane and sugar output substantially in South Asia.

Monitoring

How to control red rot of sugarcane (integrated management)

Control works best as a sequence: prevent, monitor, then act only when a threshold or a risk forecast says so, using the least disruptive option that works.

Cultural control

Biological control

Host resistance

Chemical control of red rot of sugarcane — by mode-of-action group only

Laisha names chemical options only by their resistance-committee mode-of-action group (IRAC for insects, mites and nematodes, FRAC for fungi, oomycetes and bacteria, HRAC for weeds), never by active ingredient or product. What is registered differs by country and changes over time; the label and your local plant-protection authority decide what may be used, on which crop, at what rate and with what pre-harvest interval.

Fungicides are used as sett treatments before planting where registered; they cannot cure standing infected cane. What is registered differs by country and changes over time; follow the label and your local plant-protection authority.

SchemeGroupMode of actionNotes
FRAC1Methyl benzimidazole carbamates (MBC), sett treatmentResistance risk.
FRAC3Demethylation inhibitors (DMI), sett treatmentUsed in some programmes.
FRAC11Quinone outside inhibitors (QoI)Used in some programmes.

Resistance management

Look-alikes and how to tell them apart

Host range

Sugarcane is the main host; the fungus can also infect sorghum and some wild grasses.

What is still uncertain

Grow guides for its host crops

How to grow the crop well is the first line of defence. Laisha's free grow guides cover each crop from sowing to harvest:

Not sure this is what you are seeing?Ask Laisha: describe the symptoms or send a photo, and get a reasoned first read with what to check next — for your crop, your stage and your region.Ask Laisha

Sources

  1. Glomerella tucumanensis (red rot of sugarcane) datasheet — CABI Compendium. https://doi.org/10.1079/cabicompendium.25361
  2. Colletotrichum falcatum (GLOMTU) — EPPO Global Database. https://gd.eppo.int/taxon/GLOMTU
  3. Red rot of sugarcane (Colletotrichum falcatum Went) — CABI Reviews. https://doi.org/10.1079/PAVSNNR202116023
  4. Toxin produced by Colletotrichum falcatum causing red rot of sugarcane — Mycobiology (Korean Society of Mycology). https://doi.org/10.4489/MYCO.2004.32.4.149

Written by Laisha from the sources above, in its own words. This page is general reference, not a prescription: confirm identification locally and follow the label and your plant-protection authority.