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Blossom-end rot

Physiological calcium disorder (no pathogen)

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Blossom-end rot is a dark, sunken, leathery patch at the flower end of tomato, pepper, watermelon, squash and eggplant fruit. It is not a disease and cannot spread from plant to plant: it happens when the growing tip of the fruit does not receive enough calcium, almost always because water supply to the plant is uneven. Steady watering and balanced feeding usually prevent it.

Tomatoes with dark, sunken blossom-end rot
Tomatoes with dark, sunken blossom-end rot. Photo: Siltloam, Public domain, via Wikimedia Commons.
Type
Physiological disorder · a local shortage of calcium in the fast-growing end of the fruit, usually because of an irregular water supply, salinity or excess nitrogen - not normally a lack of calcium in the soil
Main crops
Tomato, Chilli & sweet pepper, Watermelon, Pumpkin / squash, Eggplant, Melon (cantaloupe)
Found in
Global, field production, Global, protected and container production, Home gardens worldwide
Last reviewed
2026-10-19

What causes blossom-end rot?

Blossom-end rot is caused by a local shortage of calcium in the fast-growing end of the fruit, usually because of an irregular water supply, salinity or excess nitrogen - not normally a lack of calcium in the soil; it is a disorder, not an infection.

Where it occurs

Occurs wherever these crops are grown, in fields, greenhouses and gardens, and is especially common in hot, dry spells, in salty soils or water, and in soilless and container growing with irregular irrigation.

RegionStatus
Global, field productionCommon in hot, dry periods and on sandy or saline soils
Global, protected and container productionCommon where irrigation is irregular or salinity is high
Home gardens worldwideVery common

Symptoms and identification of blossom-end rot

Ripening tomato with blossom-end rot
Ripening tomato with blossom-end rot. Photo: A13ean, CC BY-SA 3.0, via Wikimedia Commons.

The cause

There is no organism. Calcium moves to the fruit in the water stream; because fruits lose little water, they receive little calcium, and the fast-growing tissue at the blossom end is the first to run short. When cells there collapse, a dry, sunken lesion forms; mould that appears later is secondary.

Signs in the crop, stage by stage

Crop stageWhat you see
Young fruit (about one-third grown)A small, water-soaked, light brown spot at the blossom end (opposite the stem), usually on the first fruits of a truss.
Developing fruitThe spot enlarges into a dark brown to black, flat or sunken, leathery patch that may cover a third or more of the fruit; in pepper, often pale, papery patches on the side near the tip.
Mature fruitAffected fruit ripens early; the patch may be colonised by moulds; internal blackening without external symptoms in some pepper and tomato varieties.

Life cycle of blossom-end rot

1Fruit set andrapid expansion2Calcium shortageat the blossom end3Visible symptomsBlossom-end rot
Life cycle of Blossom-end rot — diagram drawn by Laisha from the stages below. Durations depend on temperature.

Blossom-end rot has no life cycle; it develops during a sensitive window of about two weeks after fruit set, when fruit cells divide and expand fastest. Stress in that window - a dry spell, then heavy watering, very hot or windy days, salty water, or damaged roots - produces affected fruit a week or two later. Later fruits on the same plant are often normal once growing conditions even out.

StageDurationNotes
Fruit set and rapid expansionAbout the first 2-3 weeks after floweringThe sensitive window.
Calcium shortage at the blossom endDays of water stress or high transpirationLeaves outcompete fruit for calcium.
Visible symptomsAbout 1-2 weeks laterFirst water-soaked, then dark and sunken.

Temperature

Hot, dry, windy weather increases water loss from leaves and draws calcium away from fruit, raising the risk; very rapid growth in warm conditions after a cool period does the same.

Generations

Not applicable; occurs in episodes during each crop.

Conditions that favour it

Fluctuating soil moisture (drought then heavy watering), high salinity of soil or water, excessive nitrogen (especially ammonium) or potassium and magnesium that compete with calcium, root damage from cultivation, very acid soils low in calcium, fast-growing large-fruited or elongated varieties, and heat waves.

Economic threshold level (ETL)

There is no threshold; as a non-infectious disorder it is prevented by managing water, salinity and nutrition. Affected fruit cannot be repaired and should be removed.

Damage and yield loss from blossom-end rot

Affected fruits are unmarketable. Losses are usually a few per cent of fruit but can exceed 50% of early fruit in hot, dry spells or salty conditions, especially in elongated tomato and pepper varieties.

Monitoring

How to prevent blossom-end rot

Control works best as a sequence: prevent, monitor, then act only when a threshold or a risk forecast says so, using the least disruptive option that works.

Cultural control

Mechanical and physical control

Biological control

Host resistance

Chemical control of blossom-end rot — by mode-of-action group only

Laisha names chemical options only by their resistance-committee mode-of-action group (IRAC for insects, mites and nematodes, FRAC for fungi, oomycetes and bacteria, HRAC for weeds), never by active ingredient or product. What is registered differs by country and changes over time; the label and your local plant-protection authority decide what may be used, on which crop, at what rate and with what pre-harvest interval.

No pesticide is relevant, because this is not an infection. Foliar calcium sprays have only limited effect, because calcium sprayed on leaves moves little to the fruit; correcting watering and soil calcium matters far more. Fertiliser products and their registration differ by country; follow the label and local agronomic advice.

Resistance management

Look-alikes and how to tell them apart

Host range

Most common in tomato and sweet pepper; also watermelon, squash and zucchini, eggplant and melon. Similar calcium disorders cause bitter pit of apple, tipburn of lettuce and cabbage, and blackheart of celery.

What is still uncertain

Grow guides for its host crops

How to grow the crop well is the first line of defence. Laisha's free grow guides cover each crop from sowing to harvest:

Not sure this is what you are seeing?Ask Laisha: describe the symptoms or send a photo, and get a reasoned first read with what to check next — for your crop, your stage and your region.Ask Laisha

Sources

  1. Blossom-end rot of tomato, pepper and eggplant — University of Minnesota Extension. https://extension.umn.edu/disease-management/blossom-end-rot
  2. Blossom end rot — Royal Horticultural Society. https://www.rhs.org.uk/problems/blossom-end-rot
  3. Blossom-end rot: Tomato Pest Management Guidelines — UC IPM. https://ipm.ucanr.edu/agriculture/tomato/blossom-end-rot/
  4. Blossom-end rot in tomatoes and peppers — University of Maryland Extension. https://extension.umd.edu/resource/blossom-end-rot-vegetables

Written by Laisha from the sources above, in its own words. This page is general reference, not a prescription: confirm identification locally and follow the label and your plant-protection authority.